Pathway Editor Help

1. Starting the Pathway Editor
2. Quiting the Pathway Editor
3. Working with pathways
   • Creating a new pathway
   • Searching the pathway database
   • Opening a pathway file
   • Saving a pathway to the same file
   • Saving a pathway to a new file
   • Getting pathway information
   • Setting a pathway title
   • Assigning a pathway type
   • Adding comments
4. Managing multiple pathway windows
   • Creating a new pathway window
   • Switching between pathway windows
   • Closing a pathway window
5. Working with nodes
   • Adding a node
   • Selecting a node
   • Deleting a node
   • Moving a node
   • Getting node information
   • Setting a node label
   • Assigning a compound type
   • Selecting a compound
   • Getting compound information
   • Adding comments
   • Listing nodes
6. Working with processes
   • Adding a process
   • Adding more connections to a process
   • Selecting a process
   • Selecting a connection in a process
   • Deleting a process
   • Deleting a connection in a process
   • Moving a process
   • Getting process information
   • Setting a process label
   • Assigning a process type
   • Setting node roles in a process
   • Setting node stoichiometry in a process
   • Adding comments
   • Listing processes
7. Selecting nodes and processes
   • Selecting a node
   • Selecting a process
   • Selecting a connection in a process
   • Selecting nodes and processes in a region
   • Adding to a selection
   • Deleting from a selection
   • Selecting all
   • Unselecting all
8. Using the editing commands
   • Cut
   • Copy
   • Paste
   • Delete
   • Undo
   • Redo
9. Viewing experimental data
   • Managing the experiment list
   • Searching the experiment database
   • Viewing experimental data
   • Selecting experiments to plot in the pathway
   • Averaging experiments in plots
10. Changing your view
    • Moving side to side
    • Moving up and down
    • Zooming in and out
    • Tilting forward and back